cobs_index.FileType

class FileType

Enum of indexable file types

Members:

Any : Accept any supported file types in dir scan

Text : Text file: read as sequential symbol stream

Cortex : McCortex file

KMerBuffer : Explicit list of k-mers for testing

Fasta : FastA file, parsed as one document containing subsequences

Fastq : FastQ file, parsed as one document containing subsequences

FastaMulti : FastA multi-file, parsed as multiple documents

FastqMulti : FastQ multi-file, parsed as multiple documents

__init__(self: cobs_index.FileType, arg0: int) → None

Methods

__init__(self, arg0)

Attributes

Any
Cortex
Fasta
FastaMulti
Fastq
FastqMulti
KMerBuffer
Text
name	handle) -> str